RGC-ADOA/output/13_isg_check/isg_genelevel_rgc.csv

1	group	gene	present	our_lfc_S1	our_lfc_S2	our_lfc_null	consistent	cpm_WT	author_log2fc	author_p	bg_median_lfc
2	RGC2-like	Isg15	False
3	RGC2-like	Ifit1	False
4	RGC2-like	Ifit2	True	-2.569	-1.032	1.537	ns	15.3	-4.137	5.43917027056696e-06	0.178
5	RGC2-like	Ifit3	False
6	RGC2-like	Ifit3b	False
7	RGC2-like	Ifi27	True	-0.543	-0.917	-0.374	DOWN	30.6	-1.668	0.0125143913168659	0.178
8	RGC2-like	Ifi27l2a	False
9	RGC2-like	Ifi44	False
10	RGC2-like	Ifi47	False
11	RGC2-like	Ifitm1	False
12	RGC2-like	Ifitm2	True	-2.569	-1.605	0.964	ns	15.3	-1.833	0.119639393310113	0.178
13	RGC2-like	Ifitm3	False
14	RGC2-like	Mx1	False
15	RGC2-like	Mx2	False
16	RGC2-like	Oas1a	False
17	RGC2-like	Oas1b	True	2.546	0.964	-1.582	ns	0.0			0.178
18	RGC2-like	Oas2	False
19	RGC2-like	Oasl1	False
20	RGC2-like	Oasl2	False
21	RGC2-like	Rsad2	False
22	RGC2-like	Bst2	False
23	RGC2-like	Usp18	False
24	RGC2-like	Irf7	False
25	RGC2-like	Irf9	True	-0.022	0.688	0.71	ns	15.3	-0.329	0.498719017681588	0.178
26	RGC2-like	Stat1	False
27	RGC2-like	Stat2	True	1.53	1.754	0.224	UP	15.3	0.218	0.97053153007984	0.178
28	RGC2-like	Ddx58	False
29	RGC2-like	Ifih1	False
30	RGC2-like	Ddx60	False
31	RGC2-like	Cmpk2	True	-3.982	-2.445	1.537	ns	45.9	-4.197	2.27481513069604e-12	0.178
32	RGC2-like	Nlrc5	False
33	RGC2-like	Psmb8	False
34	RGC2-like	Psmb9	False
35	RGC2-like	Tap1	False
36	RGC2-like	Tap2	True	-0.489	-2.569	-2.08	ns	15.3	-1.814	0.12163034585952	0.178
37	RGC2-like	B2m	False
38	RGC2-like	Gbp2	False
39	RGC2-like	Gbp3	False
40	RGC2-like	Gbp4	False
41	RGC2-like	Gbp5	False
42	RGC2-like	Irgm1	False
43	RGC2-like	Trim21	False
44	RGC2-like	Xaf1	False
45	RGC2-like	Ifi35	True	0.0	2.524	2.524	ns	0.0	-2.066	0.147167712953075	0.178
46	RGC2-like	Parp9	True	1.386	2.264	0.878	ns	0.0	-1.116	0.680655332431346	0.178
47	RGC2-like	Parp14	False
48	RGC2-like	Samd9l	False
49	RGC2-like	Eif2ak2	True	2.08	3.105	1.025	ns	0.0	-0.554	0.586237491834889	0.178
50	RGC2-like	Zbp1	False
51	RGC2-like	Herc6	False
52	RGC2-like	Rtp4	True	-2.569	-2.569	0.0	ns	15.3	-3.859	1.11407029200155e-05	0.178
53	RGC2-like	Lgals3bp	False
54	RGC2-like	Ccl5	False
55	RGC1-like	Isg15	False
56	RGC1-like	Ifit1	False
57	RGC1-like	Ifit2	False
58	RGC1-like	Ifit3	False
59	RGC1-like	Ifit3b	False
60	RGC1-like	Ifi27	True	0.47	1.1	0.629	ns	4.5	0.362	0.728539464624236	0.001
61	RGC1-like	Ifi27l2a	False
62	RGC1-like	Ifi44	False
63	RGC1-like	Ifi47	False
64	RGC1-like	Ifitm1	False
65	RGC1-like	Ifitm2	False
66	RGC1-like	Ifitm3	False
67	RGC1-like	Mx1	False
68	RGC1-like	Mx2	False
69	RGC1-like	Oas1a	False
70	RGC1-like	Oas1b	False
71	RGC1-like	Oas2	False
72	RGC1-like	Oasl1	False
73	RGC1-like	Oasl2	False
74	RGC1-like	Rsad2	False
75	RGC1-like	Bst2	False
76	RGC1-like	Usp18	False
77	RGC1-like	Irf7	False
78	RGC1-like	Irf9	True	-0.644	0.285	0.929	ns	10.2	-0.685	0.0622457067944726	0.001
79	RGC1-like	Stat1	True	-0.267	0.215	0.482	ns	9.1	-0.896	0.00376800017352199	0.001
80	RGC1-like	Stat2	True	0.208	0.11	-0.098	ns	37.5			0.001
81	RGC1-like	Ddx58	False
82	RGC1-like	Ifih1	False
83	RGC1-like	Ddx60	False
84	RGC1-like	Cmpk2	False
85	RGC1-like	Nlrc5	False
86	RGC1-like	Psmb8	False
87	RGC1-like	Psmb9	False
88	RGC1-like	Tap1	False
89	RGC1-like	Tap2	False
90	RGC1-like	B2m	False
91	RGC1-like	Gbp2	False
92	RGC1-like	Gbp3	False
93	RGC1-like	Gbp4	False
94	RGC1-like	Gbp5	False
95	RGC1-like	Irgm1	False
96	RGC1-like	Trim21	False
97	RGC1-like	Xaf1	False
98	RGC1-like	Ifi35	False
99	RGC1-like	Parp9	False
100	RGC1-like	Parp14	False
101	RGC1-like	Samd9l	False
102	RGC1-like	Eif2ak2	False
103	RGC1-like	Zbp1	False
104	RGC1-like	Herc6	False
105	RGC1-like	Rtp4	False
106	RGC1-like	Lgals3bp	False
107	RGC1-like	Ccl5	False