RGC-ADOA/output/12_inflammation/inflammation_module_scores.csv

1	group	module	n_WT	median_WT	median_S1	median_S2	delta_S1	delta_S2
2	RGC2-like	IFN_alpha_ISG	7	-0.0393	-0.0332	-0.0279	0.0062	0.0114
3	RGC2-like	IFN_gamma	7	-0.0765	-0.0798	-0.0651	-0.0033	0.0115
4	RGC2-like	IL6_JAK_STAT3	7	-0.0678	-0.0497	-0.0627	0.0181	0.0051
5	RGC2-like	TNFA_NFkB	7	-0.0637	-0.0063	-0.023	0.0574	0.0407
6	RGC2-like	Complement	7	-0.1439	-0.1111	-0.109	0.0328	0.0349
7	RGC2-like	cGAS_STING	7	-0.0211	-0.0656	-0.0682	-0.0446	-0.0471
8	RGC2-like	NLRP3_inflammasome	7	-0.0895	-0.0676	-0.08	0.0219	0.0094
9	RGC2-like	UPRmt	7	0.0934	0.0283	0.009	-0.0652	-0.0844
10	RGC2-like	ISR	7	-0.1125	0.0073	-0.0907	0.1198	0.0218
11	RGC2-like	Muller_reactive_gliosis	7	-0.1552	-0.057	-0.0738	0.0982	0.0814
12	RGC2-like	Microglia_DAM	7	-0.0366	-0.0321	-0.0122	0.0045	0.0244
13	RGC2-like	Microglia_homeostatic	7	-0.0052	-0.0479	-0.0451	-0.0427	-0.04
14	RGC1-like	IFN_alpha_ISG	62	-0.0427	-0.035	-0.0332	0.0077	0.0095
15	RGC1-like	IFN_gamma	62	-0.0694	-0.062	-0.0612	0.0074	0.0082
16	RGC1-like	IL6_JAK_STAT3	62	-0.0374	-0.0493	-0.0416	-0.012	-0.0042
17	RGC1-like	TNFA_NFkB	62	-0.0236	-0.027	-0.029	-0.0035	-0.0055
18	RGC1-like	Complement	62	-0.136	-0.1185	-0.1125	0.0175	0.0236
19	RGC1-like	cGAS_STING	62	0.009	-0.062	-0.0548	-0.071	-0.0638
20	RGC1-like	NLRP3_inflammasome	62	-0.0877	-0.0784	-0.0797	0.0093	0.0081
21	RGC1-like	UPRmt	62	-0.0284	-0.0322	-0.0092	-0.0038	0.0192
22	RGC1-like	ISR	62	-0.1292	-0.1103	-0.1143	0.0189	0.0148
23	RGC1-like	Muller_reactive_gliosis	62	-0.1791	-0.0867	-0.065	0.0924	0.1141
24	RGC1-like	Microglia_DAM	62	-0.1299	-0.0375	-0.0527	0.0924	0.0772
25	RGC1-like	Microglia_homeostatic	62	-0.0386	-0.0477	-0.0393	-0.009	-0.0006
26	Muller	IFN_alpha_ISG	183	0.0104	0.0093	0.0044	-0.001	-0.0059
27	Muller	IFN_gamma	183	-0.0252	-0.0286	-0.0404	-0.0034	-0.0152
28	Muller	IL6_JAK_STAT3	183	-0.0027	0.0092	0.008	0.0119	0.0107
29	Muller	TNFA_NFkB	183	-0.0042	0.0013	-0.0186	0.0055	-0.0144
30	Muller	Complement	183	-0.0287	0.0098	-0.0033	0.0385	0.0254
31	Muller	cGAS_STING	183	-0.0298	-0.0515	-0.0499	-0.0218	-0.0201
32	Muller	NLRP3_inflammasome	183	-0.0028	-0.0474	-0.0498	-0.0446	-0.0471
33	Muller	UPRmt	183	0.0009	0.0006	-0.008	-0.0003	-0.009
34	Muller	ISR	183	-0.1052	-0.0747	-0.0721	0.0305	0.0331
35	Muller	Muller_reactive_gliosis	183	0.2367	0.3839	0.306	0.1472	0.0693
36	Muller	Microglia_DAM	183	0.1171	0.2422	0.1803	0.125	0.0632
37	Muller	Microglia_homeostatic	183	-0.0246	-0.0362	-0.037	-0.0116	-0.0124
38	Microglia	IFN_alpha_ISG	8	0.0184	0.0205	0.0276	0.0021	0.0092
39	Microglia	IFN_gamma	8	0.1776	0.0245	0.0675	-0.1531	-0.1102
40	Microglia	IL6_JAK_STAT3	8	0.2843	0.0721	0.0665	-0.2123	-0.2178
41	Microglia	TNFA_NFkB	8	0.1342	0.0455	0.0516	-0.0887	-0.0826
42	Microglia	Complement	8	0.1235	0.1238	0.0553	0.0003	-0.0683
43	Microglia	cGAS_STING	8	0.086	-0.0452	-0.0389	-0.1313	-0.1249
44	Microglia	NLRP3_inflammasome	8	0.3213	0.1892	-0.0253	-0.1321	-0.3466
45	Microglia	UPRmt	8	-0.0613	-0.0245	-0.068	0.0368	-0.0068
46	Microglia	ISR	8	-0.1088	-0.0687	-0.0647	0.0402	0.0441
47	Microglia	Muller_reactive_gliosis	8	-0.1146	0.0981	0.152	0.2127	0.2666
48	Microglia	Microglia_DAM	8	0.1362	0.2498	0.4148	0.1136	0.2786
49	Microglia	Microglia_homeostatic	8	1.1461	0.8063	0.334	-0.3399	-0.8121
50	Astrocyte	IFN_alpha_ISG	15	0.0048	-0.0041	0.0137	-0.0089	0.0089
51	Astrocyte	IFN_gamma	15	-0.0145	-0.0431	-0.0416	-0.0286	-0.0271
52	Astrocyte	IL6_JAK_STAT3	15	-0.0097	0.0363	0.0227	0.046	0.0324
53	Astrocyte	TNFA_NFkB	15	-0.0083	0.0214	-0.0333	0.0297	-0.0251
54	Astrocyte	Complement	15	-0.0248	0.0275	0.0111	0.0523	0.0359
55	Astrocyte	cGAS_STING	15	-0.0248	-0.0406	-0.0507	-0.0158	-0.026
56	Astrocyte	NLRP3_inflammasome	15	0.0897	-0.0428	-0.0463	-0.1325	-0.1359
57	Astrocyte	UPRmt	15	0.0116	-0.0124	0.0515	-0.0241	0.0399
58	Astrocyte	ISR	15	-0.0813	-0.0629	-0.0727	0.0184	0.0087
59	Astrocyte	Muller_reactive_gliosis	15	0.2695	0.4174	0.3023	0.1479	0.0328
60	Astrocyte	Microglia_DAM	15	0.123	0.1693	0.1982	0.0464	0.0752
61	Astrocyte	Microglia_homeostatic	15	-0.0145	-0.0282	-0.0375	-0.0136	-0.0229
62	Rod	IFN_alpha_ISG	1773	-0.0105	-0.0109	-0.0126	-0.0004	-0.0021
63	Rod	IFN_gamma	1773	-0.0253	-0.0254	-0.0313	-0.0	-0.0059
64	Rod	IL6_JAK_STAT3	1773	-0.0372	-0.0385	-0.044	-0.0013	-0.0068
65	Rod	TNFA_NFkB	1773	-0.017	-0.0184	-0.0213	-0.0013	-0.0043
66	Rod	Complement	1773	-0.0318	-0.0333	-0.0337	-0.0015	-0.0019
67	Rod	cGAS_STING	1773	-0.0279	-0.0284	-0.0291	-0.0005	-0.0013
68	Rod	NLRP3_inflammasome	1773	-0.0259	-0.0258	-0.0302	0.0001	-0.0043
69	Rod	UPRmt	1773	-0.0424	-0.0415	-0.0538	0.0009	-0.0114
70	Rod	ISR	1773	-0.0374	-0.0384	-0.0456	-0.001	-0.0082
71	Rod	Muller_reactive_gliosis	1773	0.1412	0.1721	0.1386	0.031	-0.0026
72	Rod	Microglia_DAM	1773	0.1274	0.1554	0.1233	0.028	-0.0041
73	Rod	Microglia_homeostatic	1773	-0.0192	-0.0198	-0.0233	-0.0006	-0.0041
74	Cone	IFN_alpha_ISG	99	-0.0314	-0.0209	-0.0211	0.0105	0.0103
75	Cone	IFN_gamma	99	-0.0603	-0.0478	-0.0416	0.0125	0.0187
76	Cone	IL6_JAK_STAT3	99	-0.018	-0.0605	-0.0591	-0.0425	-0.0411
77	Cone	TNFA_NFkB	99	0.0587	0.0425	0.0443	-0.0161	-0.0144
78	Cone	Complement	99	-0.1006	-0.0485	-0.0634	0.0522	0.0372
79	Cone	cGAS_STING	99	-0.0673	-0.0481	-0.0444	0.0192	0.0229
80	Cone	NLRP3_inflammasome	99	0.0616	-0.0439	-0.0387	-0.1055	-0.1003
81	Cone	UPRmt	99	-0.0151	0.0068	-0.0778	0.0219	-0.0627
82	Cone	ISR	99	-0.1122	-0.0811	-0.079	0.0311	0.0332
83	Cone	Muller_reactive_gliosis	99	-0.1064	0.0438	0.0537	0.1503	0.1602
84	Cone	Microglia_DAM	99	-0.0401	0.0527	0.0486	0.0928	0.0888
85	Cone	Microglia_homeostatic	99	-0.054	-0.036	-0.0329	0.018	0.0212